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years compared to 2003 and 2004. Sand shiner was more abundant in the treatment reach than <br />the control reach in 2006, and white sucker abundance was about equal. High abundance of <br />black bullhead that occurred mainly in the control reach was unusual and most were captured in <br />a few samples. <br />Continued low native fish abundance, and inconsistent response of native fishes and <br />selected non-native taxa to smallmouth bass removal, suggested that removals conducted at the <br />present levels are not having the expected effect. Mechanisms may include predation rates that <br />are too high to allow recruitment, changes in habitat quality, or levels of reproduction by adult <br />fishes that are too low to permit sufficient recruitment to occur. It appears that smallmouth bass <br />abundance levels in the main channel of the Yampa River remain too high, even in the relatively <br />low abundance year of 2004 (about 19 % relative abundance), to allow recruitment of native <br />fishes at levels that were observed as recently as 1999. <br />Yampa River fishes, isolated pool and main stem river comparisons.-Support for the <br />thesis that smallmouth bass may be negatively impacting abundance of native fishes in low- <br />velocity habitats comes from comparison of the few places where native fishes do exist in the <br />study area in relatively high numbers, isolated pools, to places where native fishes do not <br />survive, the main channel in both the control and treatment reaches. A total of 19 isolated pools <br />were sampled in the study area in the four years of study, 10 in the control reach and 9 in the <br />treatment reach (Table 2). <br />In general, the proportion of samples from isolated pool samples were low, with the <br />exception of 2004, when isolated pooled were relatively common and fewer main channel <br />samples were obtained. Native fishes were more common in isolated pools than in the main <br />channel (Table 6). For example, 13 of 19 (68 %) isolated pools that held fish supported native <br />fishes, while only 50 of 230 main channel samples (22 %) supported native fishes. From 2003- <br />2006, native fish relative abundance in isolated pools was 14%, compared to < 1 % in the main <br />channel. Conversely, mean relative abundance of smallmouth bass in isolated pools was < 5 %, <br />but in the main channel approached 50 %. <br />15 <br />