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Last modified
7/14/2009 5:02:33 PM
Creation date
5/20/2009 9:26:47 AM
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UCREFRP
UCREFRP Catalog Number
8172
Author
Jacobi, G. Z., J. E. Sublette, S. J. Herrmann, D. E. Cowley and M. D. Hatch.
Title
Final Report
USFW Year
1998.
USFW - Doc Type
Investigations of an Index of Biotic Integrity in New Mexico.
Copyright Material
NO
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chironomid faunal regions, benthic correlation divided by the number of <br />macroinvertebrate faunal regions, and permutations. <br />aquatic ecoregions defined with the <br />environmental variables was examined. <br />Here, the matrices of distances between EXplora'or' Analyses for IB1 Development <br />sites were compared using a matrix Several exploratory analyses were made <br />permutation test (Dietz, 1983; Cowley, regarding the possible utility of summary <br />1987; Cowley and Atchley, 1990), e.g., the statistics for an IBI. First, the number of <br />distance matrix for sites based on fish unique (found nowhere else) chironomid <br />presence/absence, data ..was-compared.to-.the.--species--at-a-site-was- regressed on'the total <br />distance matrix for sites based on the number of chuwomid species at the site. <br />multivariate environmental- factors. Six Second, fivquency distrNutions for number <br />matrix permutation tests were performed, of chironomWs per site and for number of <br />i. e. , fish versus environment, chironomids fish species per site were examined. Third, <br />versus environment, benthic the potential utility of fish species <br />macroinvertebrates versus environment, fish member-elevation relationship outside the <br />versus chironomids, fish versus benthic upper Rio Grande drainage was examined. <br />macroinvertebrates, and chironomids versus Here, data from a survey of the Black River <br />benthic macroinvertebrates. in southeastern New Mexico (Cowley, <br /> 1979; Cowley and Sublette, 1987) were <br />The matrix permutation test is a compared with data from the upper Rio <br />nonparametric method of comparing two Grande drainage. Fourth, the utility of an <br />similarity or dissimilarity matrices; standard additional environmental variable, distance <br />parametric and nonparametric correlation from headwaters, was examined using the <br />tests are inappropriate. The null hypothesis Black River data. <br />in the matrix permutation test is that the <br />magnitude of elements of one matrix are <br />random (uncorrelated) with respect to the ReSWtS <br />magnitude of elements in the second matrix. <br />The alternative hypothesis is that the <br />magnitude of elements in the two matrices <br />is correlated. For this report <br />matrix Aquatic Ecoreglons of the Upper Rio <br />, <br />permutation tests are performed by making Grande Drainage in New Mexico <br />10,000 permutations. In each permutation, <br />the rows and columns of one of the matrices Two aquatic ecoregions within the upper <br />(the second) are shuffled randomly and the Rio Grande drainage of New Mexico were <br />correlation coefficient between elements of defined using cluster analysis on scores for <br />the two matrices is obtained. The test multivariate environmental factors (Figure <br />statistic for the permutation test is the 1). These ecoregions were given the <br />number of correlation coefficients from the provisional names Aquatic Ecoregion 1 and <br />10,000 permutations that exceed the original Aquatic Ecoregion 2 (Figure 6). Before <br />correlation coefficient obtained before describing these ecoregions further, it is <br />permutation. The empirical probability interesting to consider the multivariate <br />(P-value) of the test is the number of <br />correlations exceeding the original <br /> <br />9
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