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<br />Previous modeling of the San Juan River in support of project authorization and Consultation <br />under Section 7 of the Endangered Species Act (ESA) relied on Colorado River Simulation <br />System (CRSS) estimates of the 1929 to 1974 monthly natural flows at Archuleta, New Mexico, <br />and Bluff. As part of the San Juan River Basin modeling exercise, an analysis of the 1929 to <br />1974 streamflow record was conducted to determine whether there were differences in the <br />statistical properties of the San Juan River Basin hydrology pre- and post-I 974. Statistics were <br />calculated using a 20-year moving window to assess changes in the mean flow and the <br />variability and seasonality of the flows. An investigation of the impacts on reservoir storage <br />needed to meet various target yields and yield failure was also performed. The 1974 to 1993 <br />record was found to exhibit significant differences from the prior record in terms of these <br />criteria. It was a relatively wet period. It was therefore determined that inclusion of the 1929- <br />1973 data would likely lead to more reasonable and more stringent estimates of low flows and <br />drought conditions. <br /> <br />Therefore, the monthly 1970 to 1993 natural flows recalculated by Reclamation as explained . <br />above were extended from 1969 back to 1929 using a spatial disaggregation model. The <br />particular disaggregation model used preserves the mean, standard deviation, and one-month lag <br />statistics of the hydrologic series. The model relies on key stations with full periods ofrecord (in <br />this case 1929 to 1993) as drivers for the record extension. The natural flows at Archuleta and <br />Bluffwere forced, by adjusting stream reach gains and losses to exactly match the CRSS natural <br />flows at Archuleta and Bluff for the period 1929 to 1969. <br /> <br />The 1935 to 1993 monthly gaged record for the San Juan River at Pagosa Springs, Colorado, <br />served as the key station for stations, including all tributaries, above Navajo Reservoir. The <br />gaged record at Pagosa Springs was extended back to 1929 using the spacial disaggregation <br />method with the 1929 to 1934 CRSS natural flow for the San Juan River near Archuleta as its <br />key station. For stations in the Animas drainage, the Animas River at Durango, Colorado, was <br />the key station for 1929 to 1993. The tributaries entering the San Juan River below Farmington <br />(La Plata, Mancos, and McElmo) were disaggregated using the La Plata River at Hesperus, . <br />Colorado, as the key station. <br /> <br />From the full set of natural flows (the 1929 to 1969 extension and the 1970 to 1993 Reclamation <br />natural flows) the gains and losses were calculated for each reach by subtracting the upstream <br />stations from the downstream station. However, for stations along the San Juan River <br />(Farmington, Shiprock, and Four Comers, New Mexico), another method was used to find the <br />gain and loss files. There were two reasons for the change: (I) for this study monthly natural <br />flows at these stations needed to be further disaggregated into daily values, and (2) the daily <br />gage error at these stations could be suppressed by using a different method to find gains and <br />losses. <br /> <br />For these stations along the mains tern of the San Juan River, the monthly natural flows for 1929 <br />to 1969 were estimated by distributing gains and losses between Archuleta and Bluff (Mexican <br />Hat). The method consisted of subtracting the monthly natural flows of the La Plata River, the <br />Mancos River, McElmo Creek, and the CRSS San Juan River near Bluff from the CRSS natural <br />flow at Archuleta. The net gains and losses in this reach were then distributed among the <br />intermediate stations along the mainstem of the San Juan River. The distribution for each reach <br />was calculated as the mean annual gain or loss using the 1970 to 1993 natural flows for the <br /> <br />A-4 <br /> <br />.... I"' <br />