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EXECUTIVE SUMMARY <br />The Green River in Utah and Colorado, downstream of Flaming Gorge Dam, offers an <br />opportunity to evaluate changes in the fish community in relation to several different dam <br />operation regimes. A primary purpose of this study was to determine the cumulative effect of <br />flow and temperature regime changes on physical habitat and native and non-native fishes in the <br />Green River downstream of Flaming Gorge Dam, including Browns Park, Lodore and Whirlpool <br />canyons, and Island-Rainbow Park. We place emphasis on comparisons between the 1994 to <br />1996 and 2002 to 2004 periods. To provide a more comprehensive historical context, we also <br />compare these recent data to findings from the pre-impoundment period (before 1962), and two <br />other post-impoundment periods, 1963 to 1978, and 1978 to 1992. We also characterize the <br />distribution of the humpback chub in Whirlpool Canyon. Recommendations for monitoring <br />effects of Flaming Gorge flow and temperature regimes on the fish community on the study <br />reach are also provided. <br />Four major dam-related events affected physical habitat and the fish community of the <br />upper Green River: dam installation in 1962, penstock modification in 1978, flow re-regulation <br />beginning in 1992, and higher peak flows, and lower base flows, and drought events since 1997. <br />The impacts of construction and operation of Flaming Gorge Dam on physical habitat in the <br />highly regulated reach of the Green River from the dam downstream to the Yampa River and in <br />Whirlpool Canyon downstream of the Yampa River were partially remediated by thermal <br />modifications implemented in 1978, discharge re-regulation in 1992, and 2002 to 2004 drought- <br />period changes to baseflow levels and patterns. High releases in 1997 and 1999 and drought- <br />induced high water temperatures created conditions that more closely resembled pre-dam <br />conditions. Peak flows were relatively high in 1997 and 1999; peak flows in most other years <br />were at the relatively low power plant capacity including those from 2002 to 2004. Flows in the <br />iv