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TABLE OF CONTENTS <br />EXECUTIVE SUMMARY .........................................................iv <br />LIST OF TABLES ..............................................................ix <br />LIST OF FIGURES ...............................................................x <br />KEY WORDS ................................................................ xiv <br />INTRODUCTION ................................................................1 <br />STUDY AREA .................................................................6 <br />METHODS ....................................................................8 <br />Collection ofsmall-bodied fish ............................................. 8 <br />Collection of large-bodied fish ............................................. 9 <br />Stream flow and water temperature data collection and presentation .............. 11 <br />Fish sample data analysis and presentation ................................... 11 <br />RESULTS AND DISCUSSION ......................................................14 <br />Effects of Flaming Gorge Dam on Green River discharge and temperature patterns, <br />Lodore Canyon ...................................................14 <br />Effects of Flaming Gorge Dam on Green River discharge and temperature patterns, <br />Whirlpool Canyon .................................................17 <br />Composition of the fish community in Browns Park, Lodore Canyon, Whirlpool Canyon, <br />and Island-Rainbow Park reaches 2002-2004 .......................... 19 <br />Comparison offish community composition across the longitudinal gradient in Browns <br />Park, Lodore and Whirlpool canyons, and Island-Rainbow Park between the <br />1994 to 1996 and 2002 to 2004 periods, seine samples ................... 23 <br />Spatial and temporal patterns of distribution, abundance, and size-structure of selected <br />species, comparison of 1994 to 1996 and 2002 to 2004 periods . ............ 26 <br />Nativefishes . ....................................................27 <br />Non-nativefishes ..................................................31 <br />Effects ofseason, year, and turbidity on capture success, electrofishing samples ..... 37 <br />Effects of reach, season, and year, on fish density, 2002 to 2004 seine samples ...... 40 <br />Trammel net sampling ................................................... 45 <br />Drift net sampling ......................................................47 <br />Species accounts .......................................................49 <br />Colorado pikeminnow .............................................49 <br />Roundtail chub ...................................................51 <br />Humpback chub ..................................................53 <br />Bonytail ........................................................55 <br />Razorback sucker .................................................57 <br />Non-native predators .............................................. 57 <br />Composition and reproductive status of the fish community of the Green River upstream <br />of the Yampa River, 1962-2004 ...................................... 60 <br />11