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and year scales for 2002 to 2004 data. Capture rates of common species in trammel net samples <br />were calculated as fish per net h, where a net h is one 22.9 m-long trammel net set for one h. We <br />also compared day-time (nets set between 0800 and 1700 h) and night-time (nets set after 1700 h <br />or before 0800 h the following day) capture rates of chubs. Species composition and abundance <br />in drift samples were compared across years. Influence of disturbance events was determined by <br />examining drift rates associated with storm-induced turbidity or flow events. Species accounts <br />for rare or endangered native fishes and selected non-native fishes present details that were not <br />previously described. <br />Historical changes in fish communities were also assessed using data for the regulated <br />reach of the Green River upstream of the Yampa River. We compared composition and <br />reproductive status of each species for time periods corresponding to just prior to Flaming Gorge <br />Dam closure (historical), just after reservoir filling and commencement of normal operations in <br />1967, after installation of a temperature control device via penstock modifications in 1978, after <br />discharge re-regulation in 1992 (1994 to 1996 sampling), and for the 2002 to 2004 period (this <br />study). Data gathered from historical sources (Bosley 1960, Gaufin et al. 1960, Banks 1964, <br />Smith 1966, Vanicek et al. 1970, Holden and Crist 1981, Bestgen and Crist 2000) were used to <br />assess reproductive status in the reach based on presence of young fish or by assumptions about <br />the probability of reproduction given water temperature regimes in the reach and presence of <br />adults. Reproductive status of fishes from 1967 to 1978 was inferred from data gathered in 1964 <br />and 1966 by Vanicek et al. (1970) and data collected in 1978 (Holden and Crist 1981) prior to <br />temperature modifications. Data describing the reproductive status of fishes in 1965 was not <br />used because flows from Flaming Gorge Dam were low and warm during reservoir-filling and <br />were not typical of conditions from 1967 to 1978 (Vanicek et al. 1970). <br />Historical changes in species composition and relative abundance of fishes specific to <br />Lodore Canyon were assessed by comparing data collected in three periods: 1978 to 1980 <br />(Holden and Crist 1981), 1994 to 1996 (Bestgen and Crist 2000), and 2002 to 2004 (this study). <br />Holden and Crist (1981) sampled fishes at fixed sites (not continuous as in the latter two periods) <br />including a 1.9-km-long upper Lodore Canyon site near Wade and Curtis Campground (RK <br />13