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SUMMARY <br />Historic flows of the Yampa River, largest tributary of the Green <br />River, have not yet been altered by dams. However, a large number of <br />water development projects are planned which may significantly impact <br />flows, and consequently, the endangered fish fauna. Several previous <br />investigators have indicated the importance of the Yampa River and the <br />upper Green River for endangered fishes, including the Colorado squaw <br />fish (Ptychocheilus lucius). Because of potential conflicts between <br />proposed water projects and the survival of endangered fishes, the U.S. <br />Fish and Wildlife Service (FWS) and the National Park Service (NPS) <br />proposed that a study of the Yampa River be initiated as part of ongoing <br />research (Colorado River Fishery Project) on the upper Colorado River <br />basin. The Yampa study was needed to: 1) supply FWS with information <br />needed to prepare Biological Opinions under Section 7 of the Endangered <br />Species Act, and 2) provide FWS and NPS with information needed for <br />planning purposes. The FWS and NPS signed a cooperative agreement in <br />the spring, 1981, to study fishes in the Green and Yampa rivers within <br />Dinosaur National Monument (DNM). FWS also initiated research on the <br />upper Yampa, above DNM, with funds provided by Congress. The study area <br />included 124 mi of the Yampa River, from Round Bottom downstream to the <br />Green/Yampa confluence, and 26 mi of the Green River, from the Green/` <br />Yampa confluence downstream to Split Mountain campground. <br />The overall study consisted of three major investigations: 1) a <br />standardized sampling program to characterize fishery habitat, fish <br />distribution and abundance; 2) a special investigations program which <br />included radiotelemetry studies of adult Colorado squawfish, and abun, <br />dance and distribution studies of young Colorado squawfish; and 3) <br />physical habitat modeling (PHABSIM) of representative and unique river <br />reaches. Eight homogeneous river reaches (designated as strata), on the <br />Yampa and four on the Green were delineated for fisheries investigations <br />and five stations were selected for physical habitat simulation surveys. <br />Five standardized fisheries sampling rotations were completed on each <br />stratum, including the lower Little Snake River, from April through <br />October 1981. Three to four surveys were conducted at each PHABSIM <br />station. <br />A total of 24 species representing 9 families was collected in the <br />Green (19 species), Yampa (24 species), and Little Snake (11 species) <br />rivers in 1981. Of the 24 total species found, nine were native (6 <br />endemic to the Colorado River basin) and 15 were introduced species. The <br />total number of fishes generally increased upstream with the exception <br />of Cross Mountain Canyon (Stratum 5) and Juniper Canyon (Stratum 7). The <br />total number of fish species also increased upstream, and was due to the <br />appearance of exotic species in samples. Most abundant native fishes <br />were bluehead and flannelmouth suckers, roundtail chub, and speckled <br />dace. Most abundant introduced species were red shiner, sand shiner, <br />redside shiner, fathead minnow, and channel catfish. Adult Colorado <br />v