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Colorado squawfish persists in the Yampa and Green <br />rivers, the upper Colorado River mainstream, and the <br />lower San Juan River (Archer et al. 1985; Tyus et al. <br />1987; Meyer and Moretti 1988; Tyus 1989). The <br />humpback chub is presently self-sustaining in the <br />Yampa River and upper Colorado River (Archer et al. <br />1985; Karp and Tyus 1989). The razorback sucker <br />persists in the lower Yampa and Green rivers, the <br />mainstream Colorado River, and the lower San Juan <br />River, but there is little indication of recruitment in <br />these remnant populations (Tyus et a1.1986; Meyer and <br />Moretti 1988; Lanigan and Tyus 1989; Tyus 1989). The <br />bonylail chub is extremely rare in the upper Colorado <br />River basin (Valdez and Clemmer 1982; U.S. Fish and <br />Wildlife Service 1987). All four fishes have been <br />extirpated in the Green River between Flaming Gorge <br />Dam and the Yampa River confluence, due to loss of <br />usable habitat following closure of the dam (Vanicek et <br />al. 1970). However, the Yampa River supports all its <br />native fish fauna (including self-sustaining populations <br />of some of the rare species), contains much rare fish <br />habitat, and contributes to the maintenance and <br />availability of usable rare fish habitat in the downstream <br />Green River. <br />Our objective is to evaluate habitat use and <br />streamflow needs of Colorado squawfish, bonytail chub, <br />humpback chub, and razorback sucker in the Yampa <br />River. Habitat requirements and factors limiting the <br />distribution and abundance of each species are <br />discussed by life history stage. Flow events considered <br />essential to the survival of these four fishes in the Green <br />River basin are identified for further quantification. Our <br />intent is to describe flow needs of Colorado squawtish, <br />bonytail and humpback chubs, and razorback sucker as <br />indicated by their habitat use. We do not provide a <br />quantification of these needs. <br />Distribution, Abundance, and <br />Habitat Use <br />The distribution and abundance of fishes indigenous <br />to the Yampa River have been studied since the early <br />1900's (Ellis 1914; Beckman 1952; Banks 1964; Vanicek <br />et al. 1970; Holden and Stalnaker 1975). Early field <br />studies provided much baseline information, although <br />they were generally restricted in scope to seasonal fish <br />surveys. More intensive, long-term sampling programs <br />in the 1970's and 1980's (Prewitt et al. 1977; Seethaler <br />1978; Wicket a1.1979, 1982, 1985; McAda and Wydoski <br />1980; Miller et a1.1982; Tyus et a1.1982a,1987; Haynes <br />et a1.1984) have provided more quantitative approaches <br />to the evaluation offish habitat use and needs. In 1979, <br />U.S. Fish and Wildlife Service (Service) developed <br />standardized methods for studying the Colorado River <br />fishes (Archer et al. 1980) and, in cooperation with the <br />State of Colorado and the National Park Service, <br />initiated fish studies in the Yampa River in fall 1980. <br />The lower 198.4 km (Echo Park to near Williams Fork) <br />was divided into eight relatively homogeneous river <br />sections, using topographic and geologic maps, aerial <br />surveys, and field reconnaissance, in an effort to <br />evaluate habitat use of the rare fishes (Miller et a1.1982). <br />The initial study area was extended to RK 224 because <br />of angler-captured tag returns of Colorado squawfish <br />from Craig, Colorado (see map opposite page 1). Data <br />gaps identified in the initial studies (Miller et al. 1982) <br />were evaluated in subsequent investigations using the <br />same river stratification and fish sampling techniques. <br />Habitat use data were compiled for all fish species <br />captured by U.S. Fish and Wildlife Service and <br />Colorado Division of Wildlife biologists (e.g., major <br />habitat type, depth, velocity, and substrate information) <br />using radiotelemetry, electrofishing, trammel netting, <br />angling, and seining. Reproductive behavior of <br />Colorado squawGsh in the Yampa River was studied <br />from 1981 to 1988 (Wick et al. 1983; Archer and Tyus <br />1984; Tyus et al. 1987; present study). Studies of winter <br />habitat use by Colorado squawfish and general habitat <br />use by humpback chub were initiated in the Yampa <br />River in 1986 (Karp and Tyus 1989; Wick and Hawkins <br />1989). Razorback sucker spawning and winter habitat <br />use have also been investigated (Miller et al. 1982; <br />Valdez and Masslich 1989; U.S. Fish and Wildlife <br />Service, unpublished data). The present report includes <br />data from published sources and unpublished data from <br />Service files in Vernal, Utah. <br />In 1984, the Biology Subcommittee of the Upper <br />Colorado River Basin Coordinating Committee and the <br />U.S. Fish and Wildlife Service identified river reaches <br />considered important to the survival and recovery of the <br />rare Colorado River fishes (Upper Colorado River <br />Basin Coordinating Committee 1984; Archer et al. <br />1986). This information was more recently updated in <br />the Recovery Implementation Program (U.S. Fish and <br />Wildlife Service 1987). We provide additional <br />information for further delineation of critical river <br />reaches in the Yampa River. This information is <br />summarized in Fig. 4 and discussed in the following <br />sections. <br />Colorado Squawfish <br />Adult <br />Adult Colorado squawfish are distributed in the <br />mainstream Yampa River from its mouth upstream to <br />Craig, Colorado (Fig. 4). The upper Yampa River (RK <br />81.6-198.4) is considered a concentration area for <br />overwintering adults (Archer et al. 1986; Fig. 4), as <br />evidenced by migration patterns of radio-tagged fish <br />(Tyus et a1.1987) and abundance data (Miller et a1.1982; <br />4 <br />