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METHODS <br />Collections of small- and large-bodied f shes were made from 1994-1996 to understand <br />the present distribution and abundance patterns of fishes in the Green River upstream of the <br />Yampa River (study objective 1). Drift net sampling of larvae and seine sampling in Green <br />River backwaters downstream of the Yampa River was added to more completely address that <br />objective. Water temperature and discharge data were used to understand the relationship of <br />physical factors to longitudinal distribution and abundance patterns of fishes in the regulated <br />portion of the Green River (objective 2). Discharge and temperature regimes associated with <br />specific dam operation events was related to changes in fish distribution and abundance patterns. <br />That information, combined with other available data from other systems in the upper Colorado <br />River basin (objective 3), was used to determine whether further changes in flow and temperature <br />regimes in the regulated reach of the Green River downstream of Flaming Gorge Dam may <br />benefit rare fishes (objective 4). <br />Collection ofsmall-bodied fish.-Low-velocity channel margin areas in Browns Park, <br />Lodore Canyon, the lower 0.8 km of the Yampa River, and Island and Rainbow parks was <br />sampled with seines (1.3 and 4.6 m length, 1.6 and 4.8-mm mesh). Seine sampling in summer <br />and autumn 1994 included Browns Park, Lodore Canyon, and the lower Yampa River. Seining <br />in summer and autumn 1995 included Browns Park, lower Lodore Canyon, Island and Rainbow <br />parks, and the lower Yampa River. Habitat types sampled were mostly backwaters, but channel <br />margin eddies and low velocity runs and pools were also sampled. More sampling effort was <br />expended in larger habitat areas and less in smaller ones so that effort expended was <br />approximately equal across different-sized areas. Riffles in the lower portion of Lodore Canyon <br />and in the Yampa River were "kick-seined", whereby substrate was vigorously disturbed and <br />dislodged fish were captured in a stationary downstream seine. Samples were preserved in 10 <br />fonnalin and identified at the Larval Fish Laboratory, Colorado State University. <br />Drift net samples collected in the Green River just upstream of the Yampa River in 1993, <br />1994, and 1995 were used to describe species composition and abundance patterns of larvae <br />6 <br />