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<br />B, Af10zymes C, mlDNA <br /> B;' ~'~] n._] <br /> Salt robusta V robusta <br /> erde <br /> Verde SaIl <br /> MRN <br /> seniinuda OW"'"] <br /> MRN seminuda <br /> WFD <br /> elegans elegans <br />I I I I I I <br />0,00 0,10 0,20 0.0 1.0 2,0 <br /> <br />1 <br /> <br />Evolution: DeMarais et at. <br /> <br />A. Morphology <br /> <br />Bill WilliamJ <br /> <br />robusta <br />Verde <br />Sail <br />MRN <br /> <br /> <br /> <br />hybrids <br /> <br /> <br />elegans <br /> <br />I -. I I <br />0,00 0,05 0,10 <br /> <br />Proc. NaIl. Acad. Sci. USA 89 (/992) <br /> <br />2749 <br /> <br />FIG. 2, Dendrograms (rooted at the midpoint) derived from morphology (A), a1lozymes (8), and mtDNA (C), as described in the text. <br /> <br />Hardy-Weinberg equilibrium in MRN and G. seminuda, and <br />multilocus tests failed to detect significant association of <br />alleles. <br />mtDNA. Limited mtDNA differentiation (0.0-0.2% se- <br />quence divergence) was present within and between popu- <br />lations of G. r. robusla. The mtDNA of G. elegans was <br />distinct from that of G. r. robusta (3.2-3.3% sequence <br />divergence) but similar to those of MRN and G. seminuda <br />(0.2-0.4%). As in G. r. robusta, limited variation was present <br />within and between samples of G. seminuda and MRN <br />(0.3-0.5%). The mtDNAs of G. elegans, G. seminuda, and <br />MRN clustered together, as did those of the various G. r. <br />robusta (Fig. 2C). mtDNAs were isolated from an additional <br />14 G. seminuda (from two localities) and 3 MRN to further <br />test for G. r. robusta-like mtDNA in the Virgin River system. <br />Cleavage with two restriction enzymes diagnostic for G. r. <br />robusta andG. elegans mtDNA (Bel I and HindIIl) yielded <br />only typical G. elegans fragment patterns in all individuals. <br /> <br />DISCUSSION <br /> <br />Wagner (33) described three steps in the study of hybrid taxa: <br />(i) detection of hybrids, (ii) test of postulated hybridity, and <br />(iii) phylogenetic placement. G. seminuda was recognized <br />early as a morphological link between G. elegans and G. r. <br />robusta. Ellis (34) and Miller (15) thought it an intergrade <br />between G. elegans and G. r. robusta (then considered <br />subspecies), or an intermediate subspecies. Carl L. Hubbs <br />speculated in 1938 that Gila from the Virgin River drainage <br />(specifically the Moapa River) were of hybrid origin (35); <br />Smith et al. (18) were the first to actually suggest the hybrid <br />hypothesis in print. Thus, Wagner's step 1 has been welI <br />established. This paper provides a test of hybrid origin (step <br />2), while phylogenetic analysis (step 3) remains to be exam- <br />ined. <br />_ Morphological,-allozymic, and,mtDNA data are congruent <br />with respect to the divergence and distinctiveness of the <br />putative parental species, G. elegans and G, r. robusta, <br />However, our analyses produced discordant estimates of <br />relatedness for G. seminuda and MRN relative to G. elegans <br />and G. r. robusta (Fig. 2). Two alternative hypotheses could <br />explain these conflicting results: (i) expression of ancestral <br />polymorphisms, and (ii) hybrid origin, <br />Ancestral Polymorphism vs. Hybrid Origin. As populations <br />diverge, relationships may become obscured by the stochas- <br />tic nature of inheritance. If this were the case in Gila, <br />discordance among inferred relationships across character <br />types could reflect insufficient time for ancestral polymor- <br />ph isms to become fixed (i.e., incomplete lineage sorting) and <br />for new diagnostic characters to evolve. <br />Given the magnitude of morphological differences between <br />G. elegans and G. r. robusta, stochastic inheritance from a <br />polymorphic ancestor seems unlikely. An ancestral form <br /> <br />would have to possess the entire range of variation and then <br />randomly give rise to populations exhibiting different mean <br />phenotypes with only a fraction of the original variance, <br />While morphological intermediates such as G. seminuda <br />might be expected under such a scenario, the existence of a <br />highly variable ancestor is more difficult to envision because <br />modem species generalIy do not possess such high levels of <br />morphological variation. <br />Patterns of allozyme variation are consistent with differ- <br />ential sorting of alleles among lineages, which would require <br />only that an ancestral form be polymorphic at the two <br />diagnostic loci. Thus, MRN and G. seminuda could have <br />retained the ancestral condition, while G. r. robusta and G. <br />elegans became fixed for alternative alleles. <br />Because of its haploid and strict maternal mode of inher- <br />itance without recombination, differential sorting of ancestral <br />polymorphism is especially likely for mtDNA (36). Thus, <br />similarity of G. seminuda, MRN, and G. elegans mtDNAs <br />could result from chance inheritance of similar haplotypes <br />from a polymorphic ancestor that possessed restriction sites <br />currently diagnostic for G. r. robusta and G. elegans. Our <br />data, however, are inconsistent with this hypothesis. Esti- <br />mates of sequence divergence between mtDNAs of G. ele- <br />gans and G. r. robustawere 8-fold greater than those among <br />G. seminuda, MRN, and G. elegans (0.4% orless) and 16-fold <br />greater than those among populations of G. r. robusta (0.2% <br />or less). Therefore, MRN and G. seminuda apparently share <br />with G. elegans an mtDNA ancestor not shared with G. r. <br />robusta. <br />Consideration of one data set in light of the other empha- <br />sizes additional inconsistencies. For example, if virtually <br />identical mtDNAs of G. seminuda, MRN, and G. elegans <br />reflect true relationships, then morphological convergence of <br />G. seminuda and especially MRN toward a G. r. robusta <br />phenotype, or divergenceofG. elegans from a G, r. robusta- <br />like ancestor, would have to have been recent and extremely <br />rapid. However, available evidence suggests that this was not <br />the case. Most modem species of western cyprinoid fishes <br />were welI differentiated by the Pliocene (37), and late Mi- <br />ocene fossils in Arizona have been referred to G. r. robusta <br />(38), Some of these had skeletal features reminiscent of G, <br />elegans and/or G. cypha, suggesting that morphological <br />divergence of Colorado River basin Gila was already under <br />way >6 million years ago, Alternatively, if morphology <br />accurately reflects among-taxa relationships, then mtDNA <br />data become difficult to interpret. For example, between the <br />morphologicalIy similar G. r, robusta and MRN, both rapid <br />divergence of mtDNAs and unreasonable convergence of <br />MRN haplotypes toward those of G. elegans would be <br />necessary to create the observed relationships. <br />The strongest argument against the ancestral polymor- <br />phism hypothesis is the general agreement of the three <br />character sets. It seems unlikely that a stochastic process <br />