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7/14/2009 5:01:47 PM
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UCREFRP
UCREFRP Catalog Number
8235
Author
Douglas, M. E., R. R. Miller and W. L. Minckley
Title
Multivariate Discrimination of Colorado Plateau Gila spp.
USFW Year
1998
USFW - Doc Type
The "Art of Seeing Well" Revisited
Copyright Material
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<br />166 <br /> <br />DOUGLAS ET AL. <br /> <br />nated groupS. This analysis was run for all species- <br />pairs and for the three species together with each <br />data type (meristic, morphometric, and field). A <br />jackknife procedure was used in each analysis to <br />estimate error probabilities for associating indi- <br />viduals to species. <br />The nonparametric analysis cannot produce a <br />discriminant function with which to classify un- <br />knowns. To correct this, and thus to classify ju- <br />veniles and unidentified specimens (as per Sofield <br />et al. 1984), a parametric discriminant analysis <br />(PROC DISCRIM; SAS 1989) was performed with <br />only five morphometric field characters (see be- <br />low) that maximally discriminated among the three <br />species and a variance-covariance matrix pooled <br />among species. Again, a jackknife procedure es- <br />timated error probabilities for the resulting dis- <br />criminant function. Kappa, a chance-corrected sta- <br />tistic to compare actual and predicted group mem- <br />bership (Titus et al. 1984; applied in Douglas <br />1993) was also calculated. A canonical variate <br />analysis (again, with the five field characters <br />above) was then performed to test significance of <br />the first three canonical variates and to plot them <br />in three-dimensional space. <br />To test efficacy of the five-character field subset <br />to correctly segregate individuals, the parametric <br />discriminant analysis was run a second time, but <br />with equal sample sizes among species (i.e., N = <br />28 for each) and within-group (rather than pooled) <br />variance-covariance matrices. To make the test <br />rigorous, those 28 G. robusta and G. cypha closest <br />to the center of the combined distribution were <br />selected (i.e., those individuals putatively most <br />difficult to discriminate). All G. elegans were used. <br /> <br />Results <br /> <br />Data Normality and Transformation <br /> <br />Only one meristic count (of 10) was normally <br />distributed in each species: gill rakers in G. elegans <br />and lateral-line scales in G. robusta and G. cypha. <br />Various transformations were unsuccessful in nor- <br />malizing the other nine meristic counts. The num- <br />ber of nonnormal morphometric characters was 5 <br />for G. robusta, 4 for G. cypha, and 10 for G. ele- <br />gans. Width of left pharyngeal bone and depth of <br />skull's frontal depression were nonnormal in all <br />three species. Bony interorbital width, tip of snout <br />to occiput, and length of upper jaw were nonnor- <br />mally distributed in two of the three species. <br />Transformed morphometric data were also test- <br />ed by species for deviations from normality. For <br />G. robusta, three of the original five nonnormal <br /> <br />characters remained so after transformation, while <br />two (of four) and zero (of 10) remained so for G. <br />cypha and G. elegans, respectively. Only one nor- <br />mally distributed character (pectoral fin length) be- <br />came nonnormal in two of three species following <br />transformation. Homogeneity of within-species <br />morphometric covariance matrices was also tested <br />for and subsequently rejected. Thus, a pooled vari- <br />ance-covariance matrix was used to derive a dis- <br />criminant function for species separation. <br /> <br />Discrimination between Study Species <br />All 109 specimens of G. robusta and G. elegans <br />were discriminated 100% of the time by either two <br />meristic characters (dorsal rays and gill rakers) or <br />a single morphometric character (depth of caudal <br />peduncle; Table 1). With field data, depth of caudal <br />peduncle again proved maximally discriminatory. <br />In all, 98.8% (85 of 86) of Gila cypha and G. <br />elegans were discriminated by three meristic char- <br />acters (Table 1). This included 100% (28 of 28) <br />of G. elegans and 98.3% (57 of 58) G. cypha. With <br />the use of only morphometric characters, 96.5% <br />(83 of 86) of all individuals were correctly allo- <br />cated. Gila cypha was correctly designated in <br />98.3% of the cases (57 of 58), and G. elegans in <br />92.9% of cases (26 of 28). Field characters clearly <br />separated the two species in 95.3% of cases (82 <br />of 86), with 98.3% of G. cypha allocated (57 of <br />58) and 89.3% of G. elegans (25 of 28). Only one <br />individual (of eight) allocated to the "wrong" spe- <br />cies was shared among the three data subsets. <br />Three meristic counts separated G. robusta and <br />G. cypha in 95.7% of cases (133 of 139; Table 1). <br />Gila cypha was correctly designated in 100% of <br />cases (58 of 58), and G. robusta in 92.3% (75 of <br />81). With only morphometric variables used, <br />99.3% (138 of 139) of individuals were correctly <br />designated; this amounted to 100% (81 of 81) of <br />G. robusta and 98.3% (57 of 58) of G. cypha. When <br />the field subset was used, 99.3% of all specimens <br />were again correctly designated to species (98.8% <br />[80 of 81] of G. robusta and 100% [58 of 58] of <br />G. cypha). None of eight specimens incorrectly <br />allocated among species was shared between the <br />three data subsets. <br />When the three species were evaluated together, <br />five meristic characters correctly designated 92.2% <br />(154 of 167) of all individuals. Gila robusta was <br />assigned in 91.4% of cases (74 of 81), G. cypha <br />in 89.7% (52 of 58), and G. elegans in 100% (28 <br />of 28). When only morphometric characters were <br />used, specimens were designated in 95.6% of cases <br />(131 of 137). Gila robusta was allocated in 100% <br /> <br />" <br />
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