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<br />presence and time and/or degree of osteogenesis <br />is more difficult because newly deposited bone <br />mineral is much more labile than mineral that <br />has been deposited for some time. The pre- <br />sence of bone mineral is usually indicated by <br />staining with alizarin Red S. This color may be <br />faint, pink, or bright red in larval fishes with <br />ages from unhatched embryos through those <br />with complete absorption ofthe yolk sac or even <br />older. To state in the absence of the red color <br />that osteogenesis or bone development is not <br />present at any of these developmental stages <br />may be incorrect without microscopic examin- <br />ation of tissue structure because bone may be in <br />an early stage of development or the mineral <br />may have been removed during fixation, clear- <br />ing or staining steps." They further observed <br />that fish larvae with obvious bone, often lose <br />bone stain while in enzyme clearing solution, <br />but that much of it remains in specimens cleared <br />in potassium hydroxide solutions. Accordingly, <br />they recommend that fish larvae be fixed in <br />neutral-buffered (pH 6.5-7.2) formalin and that <br />some be differentially stained for bone and <br />cartilage, while others are stained for bone only <br />and cleared with potassium hydroxide (instead <br />of enzymes) soon after fixation. <br /> <br />Safety <br /> <br />Many of the chemicals and solutions used <br />in clearing and staining can be hazardous and <br />should be handled and disposed of accordingly. <br /> <br />Chemicals <br /> <br />Abbreviations for applicable procedures are: <br />FP = fixation and preservation; BL = bleaching; <br />IC = initial clearing, protein digestion; CS = <br />cartilage staining; BS = bone staining; FC = final <br />clearing and storage (fmal preservation). <br /> <br />Alcian blue (powder) <br />Alizarin red S (powder) <br />Distilled water <br />Ethanol (absolute ethanol preferred, <br />denatured or 95% will suffice) CS <br />if used as preservative FP, FC <br />Formalin (saturated formaldehyde sol.) FP <br />Glacial acetic acid CS <br />Glycerin (glycerol), if used for storage FC <br />Hydrogen peroxide, 3% solution BL <br />Potassium hydroxide (KOH) BL, IC, FC, BS <br /> <br />CS <br />BS <br />ALL <br /> <br />CS,IC <br />FP <br />FP <br /> <br />Sodium borate (powder) <br />Sodium phosphate monobasic <br />Sodium phosphate dibasic (anhydrous) <br />Thymol (crystals), if glycerin is used <br />for storage <br />Trypsin powder (pancreatic protease, pan- <br />creatin; sufficiently purified to be free of <br />collagenase and elastase; trypsin from pig <br />pancreas with an activity of 300 units/mg <br />produces a clear, highly effective solu- <br />tion, but other trypsin preparations with <br />activities as low as 80 units/mg have also <br />been used successfully) <br /> <br />FC <br /> <br />IC <br /> <br />Stock solutions <br /> <br />Abbreviations for applicable procedures are <br />the same as for chemicals. <br /> <br />10% buffered formalin solution- <br />In distilled water; buffer to pH 7.0 with <br />4.0 g sodium phosphate monobasic and <br />6.5 g sodium phosphate dibasic per liter <br />of formalin solution (recommended by <br />Taylor and VanDyke 1985), or to pH 6.8 <br />with 4 g each of monobasic and dibasic <br />sodium phosphate per liter of formalin <br />solution. The latter is about twice the 1.8 <br />g each of monobasic and dibasic per liter <br />recommended by Markle (1984) for 5% <br />formalin solutions. Formalin solutions <br />can be buffered with excess marble or <br />limestone chips or limestone powder to <br />near neutral, but phosphate buffering is <br />more precise and reliable; borax (sodium <br />borate) buffered formalin is not recom- <br />mended (Taylor and Van Dyke 1985). FP <br /> <br />3-5% buffered formalin solution- <br />In distilled water; buffer with 1.8 g sodium <br />phosphate monobasic and 1.8 g sodium <br />phosphate dibasic per liter of formalin <br />solution (Markle 1984). Altematively,fixed <br />specimens can be stored in alcohol (e.g., <br />75% ethanol via a graded series of concen- <br />trations), but expect greater shrinkage, <br />deformation, and, if examined periodically, <br />fading of melanophore pigmentation than if <br />stored in dilute formalin solutions. FP <br /> <br />50% ethanol solution- <br />In distilled water. CS <br />And if used in graded series for spec- <br />imen preservation (storage). FP, FC <br /> <br />23 <br />