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<br />{)1158 <br /> <br />> <br /> <br />collected data are to be used for calculating population size, without any assumptions about <br />historical data. However, at some point the noisy independent estimates must be somehow <br />integrated into longer-term assessments of population change. One way to do that integration is <br />to plot the independent estimates then use visual or statistical regression methods to identify <br />trend patterns. The problem with this simple "state reconstruction" approach is that it fails to <br />offer guidance about causes of decline (e.g. changes in recruitment of young fish versus changes <br />in survival rate) and to properly weight estimates of varying quality due to changes over the <br />years in sampling methods, locations, etc. <br /> <br />Within-year methods for stock assessment using mark-recapture experiments are easily <br />understood. We go out and mark a known number of fish, then examine what proportion of later <br />samples are made up of these indi viduals. So for example if we mark 500 fish, and find that <br />marked fish are 20% of the fish seen in recapture samples later that year, we would conclude that <br />500 is 20% of the population size, i.e. the population size was 2500. It does not, of course, work <br />this nicely in the field. The percentage of fish marked in recapture samples can vary a lot by <br />chance alone (luck of the draw): marked fish may be less vulnerable to capture later than <br />unmarked ones (wariness, movement induced by sampling), movement of fish into and out of the <br />marking region may dilute the mark rate, and there may be differential loss of tagged fish or tags. <br />So any single point estimate must be treated with great caution. <br /> <br />More complex assessment models, such as the ones we have called "ASMR" (Age-Specific <br />Mark-Recapture) and "Supertag" in Grand Canyon studies, attempt to integrate information and <br />estimates over time by using knowledge or assumptions about how the observations are linked <br />through population dynamics processes. That is, we first build an accounting model for <br />population changes (how the numbers of fish of each age die off over time over the months and <br />years after they recruit to the population), then use this model to predict the observed historical <br />data (both within the most recent year and from past years), then use statistical estimation <br />methods to find the population model parameters (recruitment and survival rates) that best agree <br />with the data. So when such a method is "looking" at the 2001 data, it is using calculations of <br />the 2001 population structure (numbers of fish of various ages) that are based in part on <br />observations of those fish made in earlier years when the fish were younger. Any such approach <br />requires a key assumption, namely that the survival rates of fish from year to year are at least <br />somewhat predictable. Part of the model development and testing process is to search for <br />indications about whether such assumptions have been violated. We do see some indications that <br />survival rates of age 3 and older chub have varied over time, and there is consistent, strong <br />variation in survival rate with age of fish-older fish appear to have consistently higher annual <br />survival rates. <br /> <br />One way to think about the integrated assessment methods is that they produce point estimates <br />for each year of population trend, as we could obtain from fitting a line through independent <br />annual population estimates. But the points along the assessment model trend line are calculated <br />from population dynamics accounting relationships (recruitment and survival) rather than just <br />some trend formula that is "unconstrained" by any knowledge of ecological relationships that <br />have given rise to the trend. Further, the assessment model trend estimate for each year consists <br />of both fish that were seen (tagged) in earlier years (and are likely to have survived to the year in <br />question), and fish that were first seen in later years, but at sizes and ages implying that they <br /> <br />Draft - April 21, 2003 <br /> <br />3 <br />