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<br />I <br />\0 an examination of the channel configuration since 1934 compared to rhe changes we have seen <br />C:) during the research period, indicate that the general nature of the channel should not markedly <br />..... <br />'Q) change over what we see today for a very long time. Continued monitoring will help evaluate any <br />'Ut trends that may be of concern. No change in the report was made in response to this comment <br /><:.Q <br />There is increasing evidence that in addition to backwaters, main channel margins, especially in <br />areas of complex point and lateral bars supply important nursery habitat for age 0 fishes. (e.g., <br />Schiemer and Waidbacher 1992. River Cons. & Manage. Boon, Calow and Petts reds] and <br />references therein). I believe these equate to the term "slackwaters" in Table 2.1. Have the <br />contributions of these areas been investigated for larval and juvenile squawfish and razorback <br />suckers in the San Juan or other Colorado River tributaries? RESPONSE: Yes, young squaw fish <br />used low velocity habitats such as slackwaters in the San Juan River. This information is discussed <br />on pages 3- 10 and 4-48. These channel margin habitats will be sampled more frequently under the <br />proposed long term monitoring protocols being developed by the Biology Committee. <br /> <br />Much of the fish sampling reported in Chapter 4, including specific species and life stages, was done <br />by a variely of agencies (WDWR, NMGF, USFWS, USBR, UNM, etc.) using a variety of gears, <br />various personnel, and at different times and flows within and among years. How standardized <br />sampling protocols were for the same species and life stages among agencies within and across years <br />is an issue that could influence interpretation of the results. RESPONSE: Standardization of <br />collecting methods was implemented throughout much of the 7-year research period. The primary <br />sampling factors that varied were sampling times and sampling intensity. We have noted this <br />concern on page 4-40. 4-53, and other pages in Chapter 4. <br /> <br />It is particularly important that any monitoring program instituted on the San Juan be consistent so <br />that differences or similarities observed can be attributed to habitat, flow and species traits rather <br />than gear or researcher variability. I'm involved in a 7 group consortium that has just completed <br />sampling benthic fishes along the 3,300 kIn Missouri River for three years. We've used a set of <br />standard operating procedures (SOPs) to accomplish this (to illustrate the approach they can be found <br />at www.cerc.cr.usgs.gov/pubslbenfishltitle_page.hlm). While the details for the San Juan would <br />differ greatly from the Missouri the need for standardization is evident. RESPONSE: We agree and <br />have attempted to correct any problems with the Monitoring Plan that is presently being developed <br />by the Biology Committee. <br /> <br />I'm concerned at the amount of "grey" literature referenced to substantiate recommendations when <br />many of these reports were completed several years ago. While it should not be the intent of this <br />project to publish peer reviewed papers in professional journals, establishing scientific credibility <br />of the research (e.g., Ryden and AIm 1996 on San Juan and numerous papers cited on Green and <br />Yampa Rivers) is important if your recommendations are to be accepted by the various interest <br />groups. RESPONSE: For one reason or the other, much of the Colorado River information has <br />been reported in agency reports rather than peer reviewed journals. We have used peer reviewed <br />citations as much as possible, but some information remains in final reportformat. <br /> <br />Comments and Responses <br /> <br />Flow Recommendations Draft Report <br /> <br />Galat - 3 <br />